Posts tagged motd

Planned internet interruptions on 6 April 2024

As announced on WeAreVUB Staff, on Saturday April 6th, the VUB network team will perform network updates on the VUB campus, which will impact any internet connection between VUB and the outside world.

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Hydra scratch flash storage upgrade part 2 on 10 January 2024

On 10 January 2024 between 9:00-15:00, we will finalize the flash storage extension of Hydra’s scratch filesystem. During the upgrade, we will stop the scheduler to avoid putting load on the storage, and the performance of the scratch will be decreased. Running jobs will continue to run, and jobs in queue will remain queued.

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Hydra scratch flash storage upgrade on 19 December 2023

The scheduler is again running, jobs are starting again. Unfortunately, we’ve not been able to complete the flash storage upgrade as some necessary hardware components are missing. We’ll announce another upgrade moment once all hardware is available.

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Hydra upgrade 27-28 November finished

Hydra has gained a major system upgrade, a brand new scratch storage, extra compute nodes, and a new GPU cluster for interactive workflows.

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VSC User Survey

The Flemish Supercomputing Centre (VSC) is carrying out a short user survey. Please take some time to participate in it and give your feedback about our services: https://uhasselt.qualtrics.com/jfe/form/SV_e8rTPE6iYFAZ0Bo

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Big upgrade for Hydra the 27-28 November 2023

We are happy to announce a big upgrade to our beloved tier-2 HPC cluster in VUB. On Monday, November 27th 2023 at 03:00 (CET), Hydra will be shut down for 48 hours to apply a major system upgrade, renew the scratch storage and add some extra compute nodes.

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Belgian LUMI user day

Join us in Brussels on November 6th, 2023, starting at 10:00 (CEST), for the Belgian LUMI user day.

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Job scheduler outage in Hydra

On Tuesday, October 10th at around 17:30 (CEST), there was an outage of the Slurm scheduler in Hydra. Please check the output of your jobs carefully if it was in queue or running between October 10th at 17:00 CEST and October 11th at 09:00 CEST.

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Network outage at VUB main campus

16:30 The network outage in VUB main campus is resolved. Access to both the Hydra HPC cluster and the Pixiu object storage has been reestablished.

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Scheduled maintenance of HPC notebook platform

The notebook platform at notebooks.hpc.vub.be will be offline for maintenance on July 4th at 10:00 (CEST). This operation will last 30 minutes and all connections to existing lab sessions will be interrupted.

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Tier-1 Data launch event

On 9 May 12:00-13:30, the VSC is officially opening the Tier-1 Data component infrastructure. Register to participate in the online event: https://www.vscentrum.be/post/tier-1-data-launch-event

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New web portal for notebooks on the HPC

All PhD students and staff of VUB can now access our High-Performance Computing (HPC) infrastructure from a web browser. This new interface allows managing and running computational notebooks directly on our Tier-2 cluster (Hydra).

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Legacy software change

On 27 March 2023, we’ve made a change in Hydra impacting only very old software modules.

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Extra Ampere GPUs in Hydra

We are happy to announce the immediate availability of 2 more GPU nodes in Hydra adding 4 new Nvidia A100 GPUs to the cluster. These new nodes are joining the ampere_gpu partition and share the same CPU, memory and GPU configuration with the other nodes in this partition.

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New notebook platform pilot

We are very pleased to announce the beginning of the second pilot phase of the Notebook platform of VUB-HPC.

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New command prompt in Hydra

We have updated the default command prompt in Hydra with a more informative and better looking one.

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Hydra login nodes reboot

On Wednesday 23 November 2022 around 18:00 we’ll reboot the Hydra login nodes.

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Data snapshots of the scratch in Hydra

We are pleased to announce the immediate availability of data snapshots for the shared scratch storage of Hydra. Data snapshots save the state of your files and folders in the past, allowing to recover lost data from your account.

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VSC Lunch Session on OpenFOAM

On October 4th 2022, VSC is organizing a lunch session on the topic of “CFD meets HPC” (OpenFOAM).

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New Globus endpoint for Hydra

We have a new Globus endpoint to access the storage of Hydra: VSC VUB Hydra. The old endpoint has been removed.

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Hydra storage down

13:00 The issues with the storage have been solved. Login to Hydra and all other VSC clusters is back to normal. Please check all jobs that were running when the storage issues started for errors, and resubmit if necessary.

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More Ampere GPUs in Hydra

We are happy to announce the immediate availability of 2 more GPU nodes in Hydra adding 4 new Nvidia A100 GPUs to the cluster. These new nodes are joining the ampere_gpu partition and share the same CPU, memory and GPU configuration with the other nodes in this partition.

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Job monitoring and checkpoints

We have updated the documentation with new information on job monitoring, restarting jobs from checkpoints and managing data between VSC_DATA and VSC_SCRATCH in your jobs.

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Scheduled maintenance for Hydra in July

15:00 All maintenance tasks have been completed ahead of time and the cluster is back online. The job queue is resumed and all users can now log in and submit new jobs.

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Quota data synchronisation is now working again

Since the move of Hydra to the Pleinlaan campus, the synchronisation of quota usage to the VSC accountpage was not working. We have now been able to fix it.

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Slow network connection to external systems

10:00 The issues with the network have been solved and the connection of Hydra to external systems is back to full speed.

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VSC Users Day 2022

The annual VSC Users Day is back! After two years of online gatherings, VSC Users Day 2022 will be live in Ghent on June 21st, 2022.

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Hydra-VSC network failure

14:30 The firewall has been repaired, and the connections between Hydra and the other VSC clusters are again working.

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Hydra move to VUB Etterbeek campus completed

We are happy to announce that the move of Hydra to the new data center of VUB in Etterbeek campus is complete. The cluster is now back open to VSC users.

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Kickoff of operation to move Hydra into campus

The start of the operation to move the Hydra cluster to VUB Etterbeek campus is upon us. Hydra will be closed to access from Monday, April 11th at 00:00 (CEST). The move is planned to last 1 week. We will continue to be reachable at hpc@vub.be and we will communicate the progress of the move on this post.

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Hydra moves to VUB Etterbeek campus

Hydra will very soon move from ULB Solbosch campus to the recently upgraded VUB data center on the Etterbeek campus. This change will bring improved power supply, cooling and security measures to our HPC cluster. The move is scheduled in the week of April 11-15.

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VUB-HPC user survey 2022

Please take some time (~10 minutes) to fill out the short user survey at https://hpc.vub.be/survey2022

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VSC/CÉCI Workshop on Managing Workflows in HPC

On 15 and 16 February, VSC and CÉCI are organizing a free online 2-day workshop on the topic of managing workflows on HPC clusters.

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Tier-1 Info Session cutoff 1 2022

On 14 January 2022 at 12:30-13:30 VSC will organize an online Info Session on writing a Tier-1 project.

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System update in Hydra

Warning We are carrying out a routine update of the operating system in Hydra. The nodes will be progressively updated without impacting running jobs, but queue times during the roll out might be longer.

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Migration of Hydra to Slurm

The HPC team is proud to announce one of the biggest improvements for Hydra in recent years and certainly one of the most impactful for its users. Hydra is replacing its job scheduler for the Slurm Workload Manager.

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Update of the MPI stack in Hydra

The job scheduler in Hydra will be put on pause on Thursday, 16th September from 20:00 to 22:00. We will perform minor updates to the MPI stack in foss and intel toolchains. Running jobs will not be affected and users will be able to continue submitting jobs to the queue during the pause.

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Urgent system update in Hydra

Login nodes updated successfully. The system update for the rest of the nodes continues as planned.

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Reboot of scheduler

Reboot done, all is back to normal.

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Rolling system updates

Warning On Tuesday June 15 at 20:00 the login nodes will be unavailable for 30 minutes.

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User survey 2021

We have published the results of our yearly user survey, conducted in February 2021. Feedback from users’ experiences in Hydra adds valuable insight into their needs, what works well, and what needs further improvement.

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OneDrive Client in Hydra

We have improved the recommended usage of the OneDrive client in Hydra. Check the FAQ in the link below.

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VSC Tier-1 Cloud Launch Event

On May 20th 2021, VSC is launching its Tier-1 Cloud component and it’s a pleasure to invite you to this event!

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Hydra storage maintenance scheduled on 26/11

The maintenance on the storage is done and jobs are again running as normal. We are still busy with (automatically) updating all worker nodes. Until that is done, the queuing time will be slightly longer than normal.

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Hydra maintenance scheduled on 29/08

Due to maintenance work, it will not be possible to submit new jobs or view the status of submitted jobs on Saturday 29/8 between 20:00 and 23:00. Running jobs will not be impacted.

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Preventive measures for second heatwave

Warning Until next Friday (14th of August) IvyBridge nodes will be offline due to the current heatwave. All other nodes are online, including GPU nodes. Since the scope of this mesure is rather limited, the waiting time of jobs in the queue should not be affected.

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Electricity works on the cooling system

From 2 to 3 June 2020, works on an electric board of the SISC cooling system will be conducted. The operations will require to stop the cooling system for short periods of time. The computing power of the HPC clusters Hydra and Vega will be reduced to a minimal level to avoid heat problems in the data center. Therefore, waiting time for jobs in the queue will be higher then normal.

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Hydra storage maintenance scheduled on 18/05

There are a couple of hardware issues with the Hydra storage which we cannot safely fix while the cluster is running. We are going to shut down Hydra on Monday 18 May, starting at 09:00 to perform the needed repairs. We expect that we can resume normal operations by the late afternoon.

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Hydra network maintenance scheduled on 20/04

The network issues are fixed. Everything is back to normal.

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Urgent reboot of Hydra login server

The login1 server has to be rebooted to apply critical updates. This will be done on Saturday at 20:00. You can use login2.hpc.vub.be as an alternative login server during the downtime.

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VSC COVID-19 Action

Researchers working on COVID-19 can get free compute time on the Tier 1 and all Tier 2s of the VSC.

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Hydra unexpected network disconnection

The queue is back to normal operation.

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Fixed node crashes caused by MPI jobs

We fixed an issue where a MPI job could crash an entire node.

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