Posts tagged software

Softening environment of Julia modules

18/03/2024

We improved how we handle installations of Julia and Julia packages in Hydra. From now on, software modules in the cluster providing a base installation of Julia or any Julia package will not lock the working environment in any way upon load. This translates to the following features:

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Organization of Python, Perl and R packages in bundles

22/12/2023

The organization of Python, Perl and R packages in Hydra is changing with the introduction of the 2023a toolchains. The base software module for each of these languages now provides a basic installation with the core features of the language plus any tools needed to build and install your own software on top of it. Extra packages are delivered in bundle modules or with their own specific modules.

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Multiple software packages updated in Hydra

03/03/2022

The HPC team has been hard at work in the past month updating and testing many of the major software packages in Hydra. We invite all users to check these updates which include minor revisions of exiting versions with bug fixes and major new releases:

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GAMESS-US v2021-R2 available in Hydra

27/01/2022

The most recent release of GAMESS-US with version 2021-R2-patch1 is now installed in Hydra.

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AlphaFold 2.1.1 available in Hydra

15/12/2021

We are pleased to announce the availability of AlphaFold v2.1.1 in Hydra. This recent release of AlphaFold has been installed for our top of the line Nvidia A100 GPUs with 40 GB of memory.

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New documentation for SRA-Toolkit

24/08/2021

We have added a section for SRA-Toolkit to our documentation. This new documentation extends the list of instructions for specific software, which already covers 14 different applications.

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